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Bug 1915 - HERMES: connectivity analysis software

Reported 2012-12-29 21:12:00 +0100
Modified 2016-06-17 15:57:54 +0200
Product: FieldTrip
Component: core
Version: unspecified
Hardware: All
Operating System: All
Importance: P3 enhancement
Assigned to: Jan-Mathijs Schoffelen
Depends on:
See also:

Guiomar - 2012-12-29 21:12:47 +0100

(Sorry, this is not a bug ;) Dear Robert, I am writing to you in reference to the connectivity analysis software (HERMES) we presented at the Biomag. As I said to you in Paris, we are very happy to collaborate with you, if you find interesting to include Hermes in Fieldtrip. Our software mainly analyses connectivity between signals with many different methods, and has the option of computing statistics between the groups and conditions of the project, through a very easy to use GUI. Hermes does have the option to import data directly from fieldtrip, as ft is the most used tool to analyse neurophysiological data nowadays! ;) So this point together with the intuitive interface, could be interesting for working together and reach another portion of the scientists. Perhaps as you have a broader vision of the field, you have some other ideas in mind. As you commented, it also would be possible to readapt our functions to the fieldtrip format. I am open to share ideas, and available to describe our project in more detail if you are interested at any point. The paper in which we present it, its under review at NeuroInformatics. We hope to have a positive answer soon. And perhaps, if you don't mind we could send you the manuscript. Hope to talk soon. Enjoy these days and have a happy new year :) All the best, guiomar -- Julia Guiomar Niso Galán Centro de Tecnología Biomédica (CTB) Parque Científico y Tecnológico de la UPM Campus de Montegancedo 28223 Pozuelo de Alarcón, Madrid, ES

Arjen Stolk - 2013-01-16 08:27:08 +0100

Figured Jan-Mathijs may have a good view on this.

Jan-Mathijs Schoffelen - 2016-02-22 11:53:01 +0100

Is there anybody who would like to push this forward? If so, I suggest that somebody on the HERMES-end takes this on. I guess one thing that can be done, is that HERMES will support fieldtrip-style data structures. This would require a fieldtrip2hermes (and for symmetry purposes) a hermes2fieldtrip function (a bit in style of eeglab2fieldtrip (in fieldtrip/external/eeglab), or spm2fieldtrip (in fieldtrip-main) If this is not an active line of investment, I suggest to close this bug.

Jan-Mathijs Schoffelen - 2016-06-09 22:00:11 +0200

Change status, due to lack of perceived interest